Software & Materials

Our center has developed a variety of software packages, materials, and resources.

Please click the links below for access to these resources.

Whole Cell Viz

Watch a simulation of our whole cell model of M. genetalium


A quantitative image processing platform.

Deep Cell

Analyze microscopy images using deep learning.

Live-cell kinase reporters.

Cell TK

A complete image analysis pipeline


3D microscopy simulation package

© 2018 Allen Center at Stanford University